MBSDB

Molecular Breeding Supporting DataBase for Vitis spp.

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탐나라(Tamnara) 품종은 씨가 있는 유핵 품종이지만 GA 처리로 무핵으로 유도할 수 있음. GA 처리시 유전자의 발현 양상을 탐색하여 무핵 유도에 관여하는 유전자를 찾고자 함.



KEGG pathway

  Tryptophan metabolism - Vitis vinifera (wine grape)


Map View (Goto KEGG)
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Mapping Genes
-3.5
 -3
 -2.5
 -2
 -1.5
 -1
 -0.5
 0
 0.5
 1
 1.5
 2
 2.5
 3
 3.5
T-14
vs
T-13 		T-13
vs
T-12 		T-12
vs
T-10 		T-10
vs
T-7 		T-7
vs
T-5 		T-5
vs
T-2 		T-2
vs
T+0 		T+0
vs
T+2 		T+2
vs
T+5 		T+5
vs
T+9 		T-14
vs
G-13 		G-13
vs
G-12 		G-12
vs
G-10 		G-10
vs
G-7 		G-7
vs
G-5 		G-5
vs
G-2 		G-2
vs
G+0 		G+0
vs
G+2 		G+2
vs
G+5 		G+5
vs
G+9
Grape Gene             Tair : tairId          ( Desc : tairDesc )
ko:K11816 YUCCA; indole-3-pyruvate monooxygenase [EC:1.14.13.168]
-1.22
 -0.37
 -0.1
 -0.12
 -0.62
 0.92
 3.39
 -0.17
 -0.36
 -0.19
 0.26
 -0.27
 0.17
 -0.35
 0
 0.98
 0.61
 0.66
 -1.54
 -1.14
GSVIVT01035678001    Tair : AT5G25620.1 ( Desc : Flavin-binding monooxygenase family protein )
ko:K00128 E1.2.1.3; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
0.69
 -0.86
 0.1
 0.36
 0.09
 -0.09
 -0.07
 -2.01
 -0.77
 -0.82
 0.59
 -0.69
 0.46
 -0.56
 0.41
 -0.12
 0.4
 -1.95
 -1.41
 0.14
GSVIVT01018842001    Tair : AT4G36250.1 ( Desc : aldehyde dehydrogenase 3F1 )
1.29
 0.11
 -0.11
 -0.54
 0.54
 -0.87
 -1.55
 -1.33
 0.3
 0.19
 0.61
 0.16
 -0.29
 -0.29
 -0.13
 -0.06
 -0.23
 -2.47
 1
 -0.85
GSVIVT01020224001    Tair : AT3G48000.1 ( Desc : aldehyde dehydrogenase 2B4 )
ko:K03781 katE, CAT, catB, srpA; catalase [EC:1.11.1.6]
0.95
 -0.21
 0.01
 -0.92
 0.98
 -0.23
 -0.34
 -0.57
 -0.18
 0.24
 0.61
 -0.58
 0.47
 -1.05
 0.63
 -0.01
 1.11
 -1.93
 0.64
 0.14
GSVIVT01013367001    Tair : AT4G35090.1 ( Desc : catalase 2 )

Mapping compound
0
 10,000,000
 20,000,000
 30,000,000
 40,000,000
 50,000,000
 60,000,000
 70,000,000
base * 10,000,000 mouse rollover
1B 1C 1D 1F 1G 1H 1I 1J 1K 1L 1M 1N 3A 3B 3C 3D 3F 3G 3H 3I 3J 3K 3L 3M 3N
Compound AC ID CAS PPM Min PPM Max
None list
cpd:C00016 FAD; Flavin adenine dinucleotide
cpd:C00024 Acetyl-CoA; Acetyl coenzyme A
cpd:C00078 L-Tryptophan; Tryptophan; (S)-alpha-Amino-beta-(3-indolyl)-propionic acid
cpd:C00108 Anthranilate; Anthranilic acid; o-Aminobenzoic acid; Vitamin L1; 2-Aminobenzoate
cpd:C00322 2-Oxoadipate; 2-Oxoadipic acid
cpd:C00328 L-Kynurenine; 3-Anthraniloyl-L-alanine
cpd:C00331 Indolepyruvate; Indolepyruvic acid; (Indol-3-yl)pyruvate; Indole-3-pyruvate; 3-(Indol-3-yl)pyruvate
cpd:C00332 Acetoacetyl-CoA; Acetoacetyl coenzyme A; 3-Acetoacetyl-CoA
cpd:C00398 Tryptamine; 3-(2-Aminoethyl)indole
cpd:C00463 Indole; 2,3-Benzopyrrole
cpd:C00527 Glutaryl-CoA
cpd:C00632 3-Hydroxyanthranilate; 3-Hydroxyanthranilic acid
cpd:C00637 Indole-3-acetaldehyde; 2-(Indol-3-yl)acetaldehyde; Indoleacetaldehyde
cpd:C00643 5-Hydroxy-L-tryptophan; Oxitriptan
cpd:C00780 Serotonin; 3-(2-Aminoethyl)-1H-indol-5-ol; 5-Hydroxytryptamine; Enteramine
cpd:C00877 Crotonoyl-CoA; Crotonyl-CoA; 2-Butenoyl-CoA; trans-But-2-enoyl-CoA; But-2-enoyl-CoA
cpd:C00954 Indole-3-acetate; Indole-3-acetic acid; (Indol-3-yl)acetate; Indoleacetate; Indoleacetic acid; IAA
cpd:C00955 Indole-3-ethanol; Tryptophol
cpd:C00978 N-Acetylserotonin; N-Acetyl-5-hydroxytryptamine
cpd:C01111 7,8-Dihydroxykynurenate
cpd:C01144 (S)-3-Hydroxybutanoyl-CoA; (S)-3-Hydroxybutyryl-CoA
cpd:C01249 7,8-Dihydro-7,8-dihydroxykynurenate
cpd:C01252 4-(2-Aminophenyl)-2,4-dioxobutanoate
cpd:C01352 FADH2
cpd:C01598 Melatonin; N-Acetyl-5-methoxytryptamine
cpd:C01717 4-Hydroxy-2-quinolinecarboxylic acid; Kynurenic acid; Kynurenate
cpd:C01987 2-Aminophenol; 2-Hydroxyaniline; 2-Aminobenzenol; o-Aminophenol
cpd:C02043 Indolelactate
cpd:C02161 2-Aminophenoxazin-3-one; 3-Aminophenoxazone; Isophenoxazine
cpd:C02172 N-Acetylisatin; 1-Acetylisatin
cpd:C02220 2-Aminomuconate; 2-Aminomuconic acid; o-Aminomuconate
cpd:C02298 N-Acetylindoxyl; Acetylindoxyl
cpd:C02470 Xanthurenic acid; Xanthurenate
cpd:C02693 (Indol-3-yl)acetamide; Indole-3-acetamide
cpd:C02700 L-Formylkynurenine; N-Formyl-L-kynurenine; N-Formylkynurenine
cpd:C02775 2,3-Dihydroxyindole; Dihydroxyindole
cpd:C02937 Indole-3-acetaldehyde oxime; Indole-3-acetaldoxime; 3-Indoleacetaldoxime; (E)-Indol-3-ylacetaldoxime
cpd:C02938 3-Indoleacetonitrile; Indol-3-ylacetonitrile; Indole-3-acetonitrile; (Indol-3-yl)acetonitrile
cpd:C03227 3-Hydroxy-L-kynurenine
cpd:C03230 (Indol-3-yl)glycolaldehyde; 3-Indoleglycolaldehyde
cpd:C03453 gamma-Oxalocrotonate; (Z)-5-Oxohex-2-enedioate; 4-Oxalocrotonate
cpd:C03574 2-Formylaminobenzaldehyde
cpd:C03722 Quinolinate; Pyridine-2,3-dicarboxylate; Quinolinic acid; 2,3-Pyridinedicarboxylic acid
cpd:C03824 2-Aminomuconate semialdehyde; 2-Aminomuconate 6-semialdehyde
cpd:C04409 2-Amino-3-carboxymuconate semialdehyde; 2-Amino-3-(3-oxoprop-1-enyl)-but-2-enedioate; 2-Amino-3-(3-oxoprop-1-en-1-yl)but-2-enedioate
cpd:C05634 5-Hydroxyindoleacetaldehyde
cpd:C05635 5-Hydroxyindoleacetate
cpd:C05636 3-Hydroxykynurenamine
cpd:C05637 4,8-Dihydroxyquinoline; Quinoline-4,8-diol
cpd:C05638 5-Hydroxykynurenamine
cpd:C05639 4,6-Dihydroxyquinoline; Quinoline-4,6-diol
cpd:C05640 Cinnavalininate; Cinnabarinic acid
cpd:C05641 5-(3'-Carboxy-3'-oxopropenyl)-4,6-dihydroxypicolinate; 5-(3-Carboxy-3-oxopropenyl)-4,6-dihydroxypyridine-2-carboxylate
cpd:C05642 Formyl-N-acetyl-5-methoxykynurenamine
cpd:C05643 6-Hydroxymelatonin
cpd:C05644 3-Methylindolepyruvate
cpd:C05645 4-(2-Amino-3-hydroxyphenyl)-2,4-dioxobutanoate
cpd:C05646 5-Hydroxyindolepyruvate
cpd:C05647 Formyl-5-hydroxykynurenamine
cpd:C05648 5-Hydroxy-N-formylkynurenine; 5-Hydroxy-N-formyl-L-kynurenine
cpd:C05651 5-Hydroxykynurenine; 5-Hydroxy-L-kynurenine
cpd:C05652 4-(2-Amino-5-hydroxyphenyl)-2,4-dioxobutanoate
cpd:C05653 Formylanthranilate; N-Formylanthranilate; 2-(Formylamino)-benzoic acid
cpd:C05654 5-(2'-Formylethyl)-4,6-dihydroxypicolinate; 5-(beta-Formylethyl)-4,6-dihydroxypicolinate
cpd:C05655 5-(2'-Carboxyethyl)-4,6-dihydroxypicolinate; 5-(beta-Carboxyethyl)-4,6-dihydroxypicolinate
cpd:C05656 5-(3'-Carboxy-3'-oxopropyl)-4,6-dihydroxypicolinate; 5-(gamma-Carboxy-gamma-oxopropyl)-4,6-dihydroxypicolinate
cpd:C05658 Indoxyl; 1H-Indol-3-ol
cpd:C05659 5-Methoxytryptamine; 5-MeOT
cpd:C05660 5-Methoxyindoleacetate; 5-Methoxyindoleacetic acid
cpd:C05663 6-Hydroxykynurenate; 6-Hydroxykynurenic acid; 4,6-Dihydroxyquinaldic acid
cpd:C05830 8-Methoxykynurenate; Xanthurenic acid 8-methyl ether
cpd:C05831 3-Methoxyanthranilate; 3-Methoxyanthranilic acid
cpd:C05832 5-Hydroxyindoleacetylglycine
cpd:C05834 3-Methyldioxyindole; 3-Hydroxy-3-methyloxindole
cpd:C05835 2-Formaminobenzoylacetate
cpd:C05837 Glucobrassicin; Indolylmethyl glucosinolate
cpd:C06212 N-Methylserotonin
cpd:C06213 N-Methyltryptamine; N-Methylindoleethylamine; 1-Methyl-2-(3-indolyl)ethylamine
cpd:C16516 Indolylmethylthiohydroximate
cpd:C16517 Indolylmethyl-desulfoglucosinolate
cpd:C16518 S-(Indolylmethylthiohydroximoyl)-L-cysteine
cpd:C17203 N-Hydroxyl-tryptamine